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qbase software  (CellCarta)


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    Structured Review

    CellCarta qbase software
    Qbase Software, supplied by CellCarta, used in various techniques. Bioz Stars score: 99/100, based on 3712 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/qbase++software/qbase/pm42855814-68-11-13
    Average 99 stars, based on 3712 article reviews
    qbase software - by Bioz Stars, 2026-10
    99/100 stars

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    Related Articles

    Software:

    Article Title: Comparison of Host Selection and Gene Expression of Adult Lepeophtheirus Salmonis and Salmo Salar During a Cohabitation of Initially Infected and Uninfected Fish
    Article Snippet: Reference gene stability was determined using GeNormPlus software (M value ≤ 1.0, CV ≤ 0.5) (Biogazelle, Zwijnaarde, Belgium); a fourth reference gene (18S rRNA gene) was excluded from L. salmonis analysis as it was identified as being unstable. .. Samples were normalized using qBASE software (Biogazelle, Zwijnaarde, Belgium) by comparing expression of the genes of interest to the expression of the reference genes to generate a Mean Normalized Referenced Quantity (MNRQ) [24]. .. Statistical analysis of MNRQ values were completed using GraphPad Prism 6 (GraphPad Software Inc., La Jolla, CA).

    Article Title: Genetic changes in regulatory immune cells induced by pramipexole and rotigotine: implications for the treatment of Parkinson's disease.
    Article Snippet: Parkinson’s disease is a chronic degenerative disorder characterized by the death of dopaminergic neurons, associated with persistent inflammation in the central nervous system.. Immunoregulatory cells are known to play a critical role in controlling inflammation and providing neuroprotection.. While dopamine agonists, such as pramipexole and rotigotine, have proven effects on immune cells, their activity on other types of immunoregulatory cells remains unclear.

    Article Title: Amino Acid Carriers of the Solute Carrier Families 7 (SLC7) and 38 (SLC38) Are Involved in Leucine Sensing in the Brain of Atlantic Salmon (Salmo salar)
    Article Snippet: .. Relative expression of the target transcripts was calculated using qbase + software (Biogazelle, Zwijnaarde, Belgium) with actb (β-actin) as reference gene (stably expressed in this experiment). ..

    Article Title: Novel defensin-like antimicrobial peptides as promising targets for the control of Bactrocera dorsalis.
    Article Snippet: BACKGROUND: Bactrocera dorsalis (Diptera: Tephritidae), a globally invasive agricultural pest, demonstrates remarkable adaptive resilience and invasive capacity.. These traits are closely linked to its robust immunemechanisms, particularly through antimicrobial peptides (AMPs), which directly combat microbial pathogens.. RESULTS: Based on a newly assembled B. dorsalis genome, we identified six novel defensin-like AMP genes, collectively designated BdDef-212s.

    Article Title: Circulating microRNA signatures associated with response to lumbar sympathetic ganglion block in complex regional pain syndrome: an exploratory pilot study
    Article Snippet: .. Article in Press Scientific Reports https://doi.org/10.1038/s41598-026-73107-4 Bioinformatic processing and statistical analyses Relative quantification of miRNA expression was performed using qBase+ software (Biogazelle, Zwijnaarde, Belgium) based on PCR cycle threshold (Ct) values50,51. ..

    Article Title: Dehydrins and Soluble Sugars Involved in Cold Acclimation of Rosa wichurana and Rose Cultivar ‘Yesterday’
    Article Snippet: .. A normalization factor based on three validated reference genes (PGK, PRS18c, and 2-UBC9) was used for the calculation of calibrated normalized relative quantities (CNRQ) in the qbase+ software (Biogazelle, Ghent, Belgium) [41]. ..

    Article Title: Influence of exogenous glucagon-like peptide 2 on mechanisms of enteric neurotransmitter-mediated vasorelaxation in the isolated bovine mesenteric artery and vein.
    Article Snippet: .. Stability was assessed by geNorm analysis (Vandesompele et al., 2002) using qbase+ software (Biogazelle, Zwijnarrde, Belgium). ..

    Expressing:

    Article Title: Comparison of Host Selection and Gene Expression of Adult Lepeophtheirus Salmonis and Salmo Salar During a Cohabitation of Initially Infected and Uninfected Fish
    Article Snippet: Reference gene stability was determined using GeNormPlus software (M value ≤ 1.0, CV ≤ 0.5) (Biogazelle, Zwijnaarde, Belgium); a fourth reference gene (18S rRNA gene) was excluded from L. salmonis analysis as it was identified as being unstable. .. Samples were normalized using qBASE software (Biogazelle, Zwijnaarde, Belgium) by comparing expression of the genes of interest to the expression of the reference genes to generate a Mean Normalized Referenced Quantity (MNRQ) [24]. .. Statistical analysis of MNRQ values were completed using GraphPad Prism 6 (GraphPad Software Inc., La Jolla, CA).

    Article Title: Amino Acid Carriers of the Solute Carrier Families 7 (SLC7) and 38 (SLC38) Are Involved in Leucine Sensing in the Brain of Atlantic Salmon (Salmo salar)
    Article Snippet: .. Relative expression of the target transcripts was calculated using qbase + software (Biogazelle, Zwijnaarde, Belgium) with actb (β-actin) as reference gene (stably expressed in this experiment). ..

    Article Title: Novel defensin-like antimicrobial peptides as promising targets for the control of Bactrocera dorsalis.
    Article Snippet: BACKGROUND: Bactrocera dorsalis (Diptera: Tephritidae), a globally invasive agricultural pest, demonstrates remarkable adaptive resilience and invasive capacity.. These traits are closely linked to its robust immunemechanisms, particularly through antimicrobial peptides (AMPs), which directly combat microbial pathogens.. RESULTS: Based on a newly assembled B. dorsalis genome, we identified six novel defensin-like AMP genes, collectively designated BdDef-212s.

    Article Title: Circulating microRNA signatures associated with response to lumbar sympathetic ganglion block in complex regional pain syndrome: an exploratory pilot study
    Article Snippet: .. Article in Press Scientific Reports https://doi.org/10.1038/s41598-026-73107-4 Bioinformatic processing and statistical analyses Relative quantification of miRNA expression was performed using qBase+ software (Biogazelle, Zwijnaarde, Belgium) based on PCR cycle threshold (Ct) values50,51. ..

    Stability:

    Article Title: Genetic changes in regulatory immune cells induced by pramipexole and rotigotine: implications for the treatment of Parkinson's disease.
    Article Snippet: Parkinson’s disease is a chronic degenerative disorder characterized by the death of dopaminergic neurons, associated with persistent inflammation in the central nervous system.. Immunoregulatory cells are known to play a critical role in controlling inflammation and providing neuroprotection.. While dopamine agonists, such as pramipexole and rotigotine, have proven effects on immune cells, their activity on other types of immunoregulatory cells remains unclear.

    Article Title: Influence of exogenous glucagon-like peptide 2 on mechanisms of enteric neurotransmitter-mediated vasorelaxation in the isolated bovine mesenteric artery and vein.
    Article Snippet: .. Stability was assessed by geNorm analysis (Vandesompele et al., 2002) using qbase+ software (Biogazelle, Zwijnarrde, Belgium). ..

    Real-time Polymerase Chain Reaction:

    Article Title: Genetic changes in regulatory immune cells induced by pramipexole and rotigotine: implications for the treatment of Parkinson's disease.
    Article Snippet: Parkinson’s disease is a chronic degenerative disorder characterized by the death of dopaminergic neurons, associated with persistent inflammation in the central nervous system.. Immunoregulatory cells are known to play a critical role in controlling inflammation and providing neuroprotection.. While dopamine agonists, such as pramipexole and rotigotine, have proven effects on immune cells, their activity on other types of immunoregulatory cells remains unclear.

    Stable Transfection:

    Article Title: Amino Acid Carriers of the Solute Carrier Families 7 (SLC7) and 38 (SLC38) Are Involved in Leucine Sensing in the Brain of Atlantic Salmon (Salmo salar)
    Article Snippet: .. Relative expression of the target transcripts was calculated using qbase + software (Biogazelle, Zwijnaarde, Belgium) with actb (β-actin) as reference gene (stably expressed in this experiment). ..

    Sequencing:

    Article Title: Novel defensin-like antimicrobial peptides as promising targets for the control of Bactrocera dorsalis.
    Article Snippet: BACKGROUND: Bactrocera dorsalis (Diptera: Tephritidae), a globally invasive agricultural pest, demonstrates remarkable adaptive resilience and invasive capacity.. These traits are closely linked to its robust immunemechanisms, particularly through antimicrobial peptides (AMPs), which directly combat microbial pathogens.. RESULTS: Based on a newly assembled B. dorsalis genome, we identified six novel defensin-like AMP genes, collectively designated BdDef-212s.

    Biomarker Discovery:

    Article Title: Novel defensin-like antimicrobial peptides as promising targets for the control of Bactrocera dorsalis.
    Article Snippet: BACKGROUND: Bactrocera dorsalis (Diptera: Tephritidae), a globally invasive agricultural pest, demonstrates remarkable adaptive resilience and invasive capacity.. These traits are closely linked to its robust immunemechanisms, particularly through antimicrobial peptides (AMPs), which directly combat microbial pathogens.. RESULTS: Based on a newly assembled B. dorsalis genome, we identified six novel defensin-like AMP genes, collectively designated BdDef-212s.

    Quantitative RT-PCR:

    Article Title: Novel defensin-like antimicrobial peptides as promising targets for the control of Bactrocera dorsalis.
    Article Snippet: BACKGROUND: Bactrocera dorsalis (Diptera: Tephritidae), a globally invasive agricultural pest, demonstrates remarkable adaptive resilience and invasive capacity.. These traits are closely linked to its robust immunemechanisms, particularly through antimicrobial peptides (AMPs), which directly combat microbial pathogens.. RESULTS: Based on a newly assembled B. dorsalis genome, we identified six novel defensin-like AMP genes, collectively designated BdDef-212s.

    Quantitative Proteomics:

    Article Title: Circulating microRNA signatures associated with response to lumbar sympathetic ganglion block in complex regional pain syndrome: an exploratory pilot study
    Article Snippet: .. Article in Press Scientific Reports https://doi.org/10.1038/s41598-026-73107-4 Bioinformatic processing and statistical analyses Relative quantification of miRNA expression was performed using qBase+ software (Biogazelle, Zwijnaarde, Belgium) based on PCR cycle threshold (Ct) values50,51. ..

    Polymerase Chain Reaction:

    Article Title: Circulating microRNA signatures associated with response to lumbar sympathetic ganglion block in complex regional pain syndrome: an exploratory pilot study
    Article Snippet: .. Article in Press Scientific Reports https://doi.org/10.1038/s41598-026-73107-4 Bioinformatic processing and statistical analyses Relative quantification of miRNA expression was performed using qBase+ software (Biogazelle, Zwijnaarde, Belgium) based on PCR cycle threshold (Ct) values50,51. ..

    Analysis:

    Article Title: Influence of exogenous glucagon-like peptide 2 on mechanisms of enteric neurotransmitter-mediated vasorelaxation in the isolated bovine mesenteric artery and vein.
    Article Snippet: .. Stability was assessed by geNorm analysis (Vandesompele et al., 2002) using qbase+ software (Biogazelle, Zwijnarrde, Belgium). ..



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